Scott,
Service manual can be downloaded from here.
http://brpmanuals.com/skidoo-manual.htm
The best $8.50 you could ever spend.... well maybe not the best, but you know what I mean....
The SPI kit on ebay would be fine. I would at least buy base gaskets from Ski Doo and not use the Winderosa that are in the kit.
The Weisco kit is good, and again, I would buys Ski Doo base gaskets.
Now.... if plugs are fouling you may have more going on other than low compression.
Regarding doing the whole motor, now you are looking at $1500, the motor needs to come out, and if you have never
tackled something like that, perhaps it might be over your head. If you take it to a shop, you would be looking at $2000.
You could look at CV Tech for a re-manufactured short block.
Glad you and the previous owner kept up on the general maintenance.
If you are planning on keeping it for another year or 2, then I would do top end.
If your planning on long term, then perhaps a complete motor would be worth it.
Or.... wait till spring and pony up for a new left over at a bargain price.
Good luck!
Kev